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Intron Name: Anas_platyrhynchos_platyrhynchos_1_80061842_80065532_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80061842 - 80065532

Intron Length:

3691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCCCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAC

U12 Branch Point Sequence:

TTGTCCCTCACA

Flanking Amino Acid:

KMFFIQACRGDETDRGVDQR

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

55.5

0.14

64.3

32.4

Major PPT

70.7

0.47

0.7

62.5

28.6

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

59.1

0.28

2.1

41.3

Associated Gene:

Gene:

CASP2

Ensembl Gene ID:

ENSAPLG00000004839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005035

80060387 - 80076681

16295