Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_80119370_80119451_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80119370 - 80119451

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCTA

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TGCTGTTCAAGC

Flanking Amino Acid:

AECPNSTSCSDREKLRVVGG

Intron Amino Acid Position:

777

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

69.1

43.5

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

86.2

0.81

0.8

80.6

Minor 5ss

42.3

-0.9

3.1

45.4

Minor BPS

44.3

-0.4

2.1

54.58

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005735

80118347 - 80137744

19398