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Intron Name: Anas_platyrhynchos_platyrhynchos_1_80119397_80120411_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

80119397 - 80120411

Intron Length:

1015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATCTGTA

5'SS Class:

weak_major

3'SS Sequence:

CCTGCTGTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATTG

Flanking Amino Acid:

THISCTGNYKSTQKYVCFAD

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.2

67.1

38.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

62.5

0.28

1.1

59.1

Minor 5ss

51.2

0.04

2.9

70.1

40.9

Minor BPS

68.9

0.45

1.6

74.56

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026735

80118347 - 80137650

19304