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Intron Name: Anas_platyrhynchos_platyrhynchos_1_80199825_80201163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80199825 - 80201163

Intron Length:

1339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAATGAAT

5'SS Class:

major

3'SS Sequence:

TACTTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TCTGTTTTACTT

Flanking Amino Acid:

DQLFYFSFAHAMCGHQDPEE

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

73.5

36.6

Major BPS

68.8

0.47

1.2

63.4

Major PPT

83.9

0.76

0.8

81.5

30.1

Minor 5ss

36.4

-1.5

3.3

53.2

Minor BPS

53.3

0.18

1.7

69.97

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005792

80172015 - 80201340

29326