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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8041697_8051737_F

Intron Information:

Intron Rank:

124307

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8041697 - 8051737

Intron Length:

10041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATTTTTC

5'SS Class:

weak_major

3'SS Sequence:

CCCTTTCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGCAT

U12 Branch Point Sequence:

GCTTTGTTAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

69.5

35.6

Major BPS

63.3

0.33

1.5

41.2

Major PPT

77.6

0.62

0.7

25.3

Minor 5ss

53.8

0.13

2.3

39.2

Minor BPS

48.4

-0.1

2.2

63.26

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028583

8041059 - 8052841

11783