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Intron Name: Anas_platyrhynchos_platyrhynchos_1_80420283_80420382_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80420283 - 80420382

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGCAT

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTGTTGTTATTT

Flanking Amino Acid:

WCVATFFFGARAKITQTSSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

72.4

38.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

85.7

0.8

0.7

80.8

31.3

Minor 5ss

34.1

-1.8

3.5

47.7

42.3

Minor BPS

49.9

0.07

2.2

74.68

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038522

80419775 - 80421169

1395

ENSAPLT00000007913

80419775 - 80421708

1934