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Intron Name: Anas_platyrhynchos_platyrhynchos_1_80740995_80745595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80740995 - 80745595

Intron Length:

4601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTTAGTGCT

5'SS Class:

major

3'SS Sequence:

TATCTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATACTTTTATCT

Flanking Amino Acid:

EKNELEWALKKKTAAFDEEI

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.56

1.2

73.7

35.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

83.1

0.74

0.7

81.6

Minor 5ss

33.4

-1.9

3.1

43.9

37.1

Minor BPS

56.7

0.29

1.5

72.22

38.6

Associated Gene:

Gene:

CRACR2A

Ensembl Gene ID:

ENSAPLG00000009227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009614

80706608 - 80754073

47466