Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_80749552_80751063_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80749552 - 80751063

Intron Length:

1512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGTTTTGTGATT

Flanking Amino Acid:

KGFITCQDMQRLYPELPLSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

81.3

0.71

0.9

78.1

40.1

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

51.1

0.12

74.33

37.3

Associated Gene:

Gene:

CRACR2A

Ensembl Gene ID:

ENSAPLG00000009227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009614

80706608 - 80754073

47466