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Intron Name: Anas_platyrhynchos_platyrhynchos_1_80897857_80974716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

80897857 - 80974716

Intron Length:

76860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

GTTTTCCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTATCTGGATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

56.7

42.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

83.9

0.76

0.7

Minor 5ss

33.3

-1.9

35.1

Minor BPS

58.1

0.24

1.5

70.6

34.6

Associated Gene:

Gene:

PARP11

Ensembl Gene ID:

ENSAPLG00000018611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018662

80809140 - 80975081

165942