Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_81002574_81010768_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

81002574 - 81010768

Intron Length:

8195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

CAGTTTGCTAAAG|T

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

ACTCTAC

U12 Branch Point Sequence:

TGGACTCTACCA

Flanking Amino Acid:

EIQAKLKVLWCQLFSHEEMY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.2

62.3

44.7

Major BPS

-0.1

1.2

44.1

38.1

Major PPT

60.4

0.23

1.1

59.5

40.7

Minor 5ss

88.3

1.29

1.3

81.8

38.5

Minor BPS

-0.3

1.9

57.36

Associated Gene:

Gene:

TEAD4

Ensembl Gene ID:

ENSAPLG00000010018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020599

81002313 - 81014040

11728