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Intron Name: Anas_platyrhynchos_platyrhynchos_1_81056636_81059042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81056636 - 81059042

Intron Length:

2407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

ACTTGTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

CATTCCTGAAAA

Flanking Amino Acid:

TRQELAAIYYETNVLGFKGP

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

71.2

0.53

70.3

31.9

Major PPT

78.1

0.63

0.9

74.2

39.6

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

64.2

0.44

1.6

71.21

40.2

Associated Gene:

Gene:

TULP3

Ensembl Gene ID:

ENSAPLG00000010842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011307

81053572 - 81081115

27544

ENSAPLT00000042238

81053572 - 81086384

32813

ENSAPLT00000034053

81053572 - 81068187

14616

ENSAPLT00000019436

81053572 - 81090380

36809