Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_81063311_81065976_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81063311 - 81065976

Intron Length:

2666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGGCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTCTCTTTCATT

Flanking Amino Acid:

TPFHSDVMLHGIDGPAAFLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

63.1

0.29

1.1

61.4

39.8

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

66.9

0.61

1.7

82.98

39.3

Associated Gene:

Gene:

TULP3

Ensembl Gene ID:

ENSAPLG00000010842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042238

81053572 - 81086384

32813

ENSAPLT00000034053

81053572 - 81068187

14616

ENSAPLT00000019436

81053572 - 81090380

36809

ENSAPLT00000011307

81053572 - 81081115

27544