Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_81087518_81090111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

81087518 - 81090111

Intron Length:

2594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTTGGTATA

5'SS Class:

major

3'SS Sequence:

TCTTGACCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.3

70.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.5

0.64

0.9

74.5

35.4

Minor 5ss

33.8

-1.8

2.9

35.1

41.1

Minor BPS

63.6

0.51

1.5

78.46

Associated Gene:

Gene:

TULP3

Ensembl Gene ID:

ENSAPLG00000010842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019436

81053572 - 81090380

36809