Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_81095019_81095600_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81095019 - 81095600

Intron Length:

582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGCTACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCCCTCTCAATG

Flanking Amino Acid:

RCLTLDQVFKPLDLGSPTSP

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.54

43.8

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

49.6

-0.1

1.6

52.15

43.1

Associated Gene:

Gene:

FOXM1

Ensembl Gene ID:

ENSAPLG00000011353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011827

81091415 - 81099435

8021