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Intron Name: Anas_platyrhynchos_platyrhynchos_1_81114118_81119708_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

81114118 - 81119708

Intron Length:

5591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

GTGATGGAGACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTCTTTGTGATG

Flanking Amino Acid:

LTRLGTSKDLQPHSVVQRRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

69.4

36.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

49.5

-0

1.2

42.3

46.6

Minor 5ss

29.2

-2.4

2.7

30.5

36.3

Minor BPS

47.1

-0.3

56.54

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012453

81112983 - 81122710

9728