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Intron Name: Anas_platyrhynchos_platyrhynchos_1_81119808_81119858_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

81119808 - 81119858

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCAAAAGAC

5'SS Class:

major

3'SS Sequence:

CAGGACAAAAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAAAGAT

U12 Branch Point Sequence:

AAAGATGGAAAA

Flanking Amino Acid:

VRSAWVQSPLTSALLIQCQV

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.2

64.2

41.2

Major BPS

50.8

0.02

1.1

47.1

36.1

Major PPT

39.6

-0.6

1.6

29.5

34.6

Minor 5ss

19.9

-3.5

28.8

37.8

Minor BPS

34.8

-1.1

39.05

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012453

81112983 - 81122710

9728