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Intron Name: Anas_platyrhynchos_platyrhynchos_1_81119902_81122675_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

81119902 - 81122675

Intron Length:

2774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGCTGCTC

5'SS Class:

weak_major

3'SS Sequence:

CCTCTGGGTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATACAT

U12 Branch Point Sequence:

GCAGACAGAAGA

Flanking Amino Acid:

LIQCQVRQQHVHFQTVLPLK

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.9

0.14

1.1

48.2

42.2

Major BPS

57.2

0.18

1.2

39.8

Major PPT

65.7

0.35

1.1

56.5

43.4

Minor 5ss

29.4

-2.4

3.5

41.9

Minor BPS

36.4

-1

1.9

39.89

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012453

81112983 - 81122710

9728