Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_81139134_81139726_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81139134 - 81139726

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGATC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

TTCTCCATACTT

Flanking Amino Acid:

ADENVSAFCAGLYACKGGCN

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

82.1

Major BPS

64.7

0.37

1.3

74.7

Major PPT

75.9

0.58

0.8

71.7

32.8

Minor 5ss

31.4

-2.1

3.2

42.1

Minor BPS

59.5

0.38

1.9

80.51

41.8

Associated Gene:

Gene:

ITFG2

Ensembl Gene ID:

ENSAPLG00000011976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012482

81138666 - 81150072

11407

ENSAPLT00000047431

81137479 - 81150169

12691