Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_81146631_81147000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81146631 - 81147000

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTGCCGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TAATTCTGACCA

Flanking Amino Acid:

LLKKWLLEGQVDSLSVNPGP

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

65.4

0.35

57.5

38.7

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

54.2

0.13

1.7

66.14

39.8

Associated Gene:

Gene:

ITFG2

Ensembl Gene ID:

ENSAPLG00000011976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012482

81138666 - 81150072

11407

ENSAPLT00000047431

81137479 - 81150169

12691