Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_81162912_81164204_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81162912 - 81164204

Intron Length:

1293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

TTGACTTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TGAAATTTGACT

Flanking Amino Acid:

RDKFSFDLGKGEVIKAWDIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

79.2

0.66

0.9

72.9

37.4

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

54.8

0.23

1.6

70.58

39.9

Associated Gene:

Gene:

FKBP4

Ensembl Gene ID:

ENSAPLG00000012198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012729

81152223 - 81166814

14592