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Intron Name: Anas_platyrhynchos_platyrhynchos_1_81196633_81199060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81196633 - 81199060

Intron Length:

2428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

GTCTTAGTAACT

Flanking Amino Acid:

TSETQKIADEVKPQLEEKEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

75.8

0.58

80.3

32.2

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

49.3

0.03

2.2

73.22

43.6

Associated Gene:

Gene:

CSTB

Ensembl Gene ID:

ENSAPLG00000016697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038072

81195756 - 81199126

3371