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Intron Name: Anas_platyrhynchos_platyrhynchos_1_81370005_81388696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81370005 - 81388696

Intron Length:

18692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATATG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TTTTTCCTATTT

Flanking Amino Acid:

IREKRNKIKEMMKHAWDNYR

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.2

33.9

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

77.9

0.63

0.7

76.9

25.1

Minor 5ss

38.7

-1.3

2.9

50.6

45.9

Minor BPS

60.1

0.4

1.9

84.08

Associated Gene:

Gene:

MAN1A2

Ensembl Gene ID:

ENSAPLG00000009246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043542

81340979 - 81474798

133820

ENSAPLT00000045556

81340829 - 81474188

133360