Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_81903387_81904121_F

Intron Information:

Intron Rank:

136017

Intron Class:

major

Intron Phase:

Intron Coordinates:

81903387 - 81904121

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGAAT

5'SS Class:

major

3'SS Sequence:

TGTTCCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TGTTCCTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

73.2

37.1

Major BPS

66.1

0.4

31.5

Major PPT

86.3

0.82

0.8

80.2

31.9

Minor 5ss

40.1

-1.1

3.2

47.4

Minor BPS

77.7

0.87

1.5

84.68

34.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041680

81903335 - 81914353

11019