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Intron Name: Anas_platyrhynchos_platyrhynchos_1_81984200_82000674_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81984200 - 82000674

Intron Length:

16475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

ATACAAGTAATA

Flanking Amino Acid:

KVKDVPMFYEVVEAAKAILD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

38.1

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

0.79

0.6

81.4

23.7

Minor 5ss

38.2

-1.3

3.1

49.4

46.8

Minor BPS

41.9

-0.6

2.2

54.71

37.3

Associated Gene:

Gene:

SPAG17

Ensembl Gene ID:

ENSAPLG00000009356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009749

81979268 - 82082358

103091