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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82000807_82017054_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82000807 - 82017054

Intron Length:

16248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTACAG

5'SS Class:

major

3'SS Sequence:

TTTTCTGTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATCTTATTT

Flanking Amino Acid:

DLQRREAEKKLALGSALFES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

55.3

43.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.8

0.78

0.8

81.1

30.9

Minor 5ss

-2.3

3.3

38.4

46.6

Minor BPS

0.61

1.6

84.12

Associated Gene:

Gene:

SPAG17

Ensembl Gene ID:

ENSAPLG00000009356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009744

81997012 - 82022422

25411