Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_82019501_82019583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82019501 - 82019583

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGTT

5'SS Class:

major

3'SS Sequence:

CTTTTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

CTTTTTTTAACA

Flanking Amino Acid:

SLPLSDSEKKNLYDYFAPKY

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

79.1

34.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

0.83

0.8

84.4

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

79.3

0.92

1.1

82.25

33.1

Associated Gene:

Gene:

SPAG17

Ensembl Gene ID:

ENSAPLG00000009356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009749

81979268 - 82082358

103091

ENSAPLT00000009744

81997012 - 82022422

25411