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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82049618_82051324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82049618 - 82051324

Intron Length:

1707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTTCA

5'SS Class:

major

3'SS Sequence:

TTGCTTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TAGCCTCTAATA

Flanking Amino Acid:

VKYMMDGSTWILFADGTVSR

Intron Amino Acid Position:

1161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.3

36.5

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

84.3

0.77

0.7

80.8

31.2

Minor 5ss

46.1

-0.4

2.4

50.4

Minor BPS

0.09

1.6

62.67

37.6

Associated Gene:

Gene:

SPAG17

Ensembl Gene ID:

ENSAPLG00000009356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009749

81979268 - 82082358

103091