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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82103050_82103877_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
82103050 - 82103877

Intron Length:
828

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGCTCA

5'SS Class:
strong_major

3'SS Sequence:
TTTTTTCCTGTAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCCAGAC

U12 Branch Point Sequence:
TTTTTTTTTCCT

Flanking Amino Acid:
TLELDESPEERLLKCSKVGS

Intron Amino Acid Position:
264

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.6
0.93
0.9
77.7
33.5

Major BPS
51.6
0.04
1.1
48.6
36.6

Major PPT
89.2
0.88
0.6
86
21

Minor 5ss
44.1
-0.6
2.8
56.9
47.3

Minor BPS
45.5
-0.2
3.6
82.93
38.6

Associated Gene:

Gene:
WDR3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

82087648 - 82108951
21304