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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82128522_82129072_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
82128522 - 82129072

Intron Length:
551

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGACTT

5'SS Class:
strong_major

3'SS Sequence:
CTTTCCATCTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATATAAT

U12 Branch Point Sequence:
TATAATTTCACT

Flanking Amino Acid:
IPVTLIDMEKALLYFIHVMD

Intron Amino Acid Position:
368

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.3
1
0.8
84.6
33.3

Major BPS
79
0.72
1
78.4
31.2

Major PPT
80.1
0.68
0.8
77.7
29.4

Minor 5ss
37.9
-1.4
3.3
56.5
47.6

Minor BPS
51.7
0.13
2
74.92
41.5

Associated Gene:

Gene:
GDAP2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

82113952 - 82131453
17502

82113952 - 82132141
18190