Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_82169481_82169717_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

82169481 - 82169717

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGAAC

5'SS Class:

major

3'SS Sequence:

TCATGGAGGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGTCAT

U12 Branch Point Sequence:

CCTTCCGTCATG

Flanking Amino Acid:

TEVLYRCRKCRRSLFRSSSI

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

67.6

37.3

Major BPS

59.9

0.25

1.3

43.2

Major PPT

51.8

0.04

1.2

46.1

44.6

Minor 5ss

38.7

-1.3

3.1

51.2

45.6

Minor BPS

45.7

-0.4

2.4

54.08

47.7

Associated Gene:

Gene:

DUSP12

Ensembl Gene ID:

ENSAPLG00000019619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027824

82167686 - 82171688

4003