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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82185487_82187185_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82185487 - 82187185

Intron Length:

1699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAC

U12 Branch Point Sequence:

AAAACATTCACG

Flanking Amino Acid:

VGYVHGVSGPVVTACNMAGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

Major BPS

69.9

0.5

31.5

Major PPT

82.1

0.72

0.8

76.9

31.8

Minor 5ss

40.4

-1.1

3.2

56.3

42.5

Minor BPS

45.3

-0.5

2.1

50.43

42.7

Associated Gene:

Gene:

ATP6V1A

Ensembl Gene ID:

ENSAPLG00000023661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031221

82171365 - 82187280

15916