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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82266292_82266958_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
82266292 - 82266958

Intron Length:
667

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTACTGTGT

5'SS Class:
major

3'SS Sequence:
TGCTGTGCTCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCTTCAC

U12 Branch Point Sequence:
TCACCCTGCATG

Flanking Amino Acid:
TPEGSSYGAIDESSSSGGRQ

Intron Amino Acid Position:
367

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62.4
0.29
1.1
56.1
43.3

Major BPS
65.1
0.38
1.1
68.9
36.5

Major PPT
71.3
0.48
1
61.5
44.6

Minor 5ss
37.6
-1.4
3.5
53.3
45.7

Minor BPS
45.8
-0.4
1.9
50.5
43.7

Associated Gene:

Gene:
SIDT1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

82256350 - 82292184
35835

82254897 - 82292184
37288

82256350 - 82292184
35835