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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82301096_82302260_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

82301096 - 82302260

Intron Length:

1165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCTAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

GTCTCCTAAAAA

Flanking Amino Acid:

ILSESVMDSQALNEVQEEAL

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

55.5

0.12

1.1

36.9

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

59.9

0.31

1.8

69.33

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036835

82296594 - 82316987

20394

ENSAPLT00000030014

82296594 - 82319019

22426

ENSAPLT00000020132

82295676 - 82314544

18869

ENSAPLT00000016311

82296594 - 82318711

22118