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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82321470_82325787_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

82321470 - 82325787

Intron Length:

4318

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAATGCCC

5'SS Class:

major

3'SS Sequence:

ACAGCCACCACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCACAG

U12 Branch Point Sequence:

ATCGCCACAGCC

Flanking Amino Acid:

HLAVWPHELQAAAISVLCPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.3

63.1

39.8

Major BPS

-0.4

1.4

48.6

36.6

Major PPT

56.5

0.15

0.9

47.3

34.5

Minor 5ss

21.3

-3.3

3.9

26.1

36.4

Minor BPS

42.8

-0.5

54.05

43.6

Associated Gene:

Gene:

TRIM45

Ensembl Gene ID:

ENSAPLG00000015615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016271

82321373 - 82331958

10586