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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82338953_82340311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82338953 - 82340311

Intron Length:

1359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATGAG

U12 Branch Point Sequence:

TTTCCTTTCTCT

Flanking Amino Acid:

GVAELQYQTGAFSTPNVQVE

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

29.3

Major BPS

45.8

-0.2

1.5

39.4

40.4

Major PPT

77.2

0.61

0.7

69.3

31.3

Minor 5ss

26.1

-2.7

2.9

29.9

43.2

Minor BPS

44.8

-0.3

3.6

81.06

40.9

Associated Gene:

Gene:

VTCN1

Ensembl Gene ID:

ENSAPLG00000015540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016192

82337796 - 82342560

4765