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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82347528_82347666_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82347528 - 82347666

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTCCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

GTTCACCGAGCT

Flanking Amino Acid:

VQYGEAPGMGCVEDPEDPVA

Intron Amino Acid Position:

1194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

0.28

1.1

63.1

35.8

Major PPT

81.7

0.71

0.7

80.3

Minor 5ss

28.5

-2.5

3.1

31.8

42.6

Minor BPS

43.1

-0.4

2.1

65.94

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036915

82345754 - 82357592

11839

ENSAPLT00000035345

82345754 - 82364065

18312

ENSAPLT00000016119

82345754 - 82364065

18312

ENSAPLT00000043582

82345754 - 82364156

18403