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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82347830_82348038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82347830 - 82348038

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGATC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCTCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

ACACCCCTCACT

Flanking Amino Acid:

SHTGVRQASARVLVEDGTGE

Intron Amino Acid Position:

1139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

77.3

37.9

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

67.8

0.4

0.9

34.8

Minor 5ss

37.3

-1.4

3.3

52.9

44.1

Minor BPS

47.6

-0.1

2.1

65.7

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036915

82345754 - 82357592

11839

ENSAPLT00000035345

82345754 - 82364065

18312

ENSAPLT00000016119

82345754 - 82364065

18312

ENSAPLT00000043582

82345754 - 82364156

18403