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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82351198_82351295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82351198 - 82351295

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

TTCTCTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTCAC

U12 Branch Point Sequence:

ACCCTCTGACTT

Flanking Amino Acid:

LYRFIVPRCSAWNSHLACQG

Intron Amino Acid Position:

872

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

59.1

45.8

Major BPS

67.1

0.43

1.2

69.3

37.7

Major PPT

79.9

0.67

0.8

37.4

Minor 5ss

29.1

-2.4

3.5

38.2

46.7

Minor BPS

45.2

-0.2

1.6

55.65

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035345

82345754 - 82364065

18312

ENSAPLT00000043582

82345754 - 82364156

18403