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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82355963_82356129_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82355963 - 82356129

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CATTCCCGAATT

Flanking Amino Acid:

TKKSKMISYVGTITKVLNAQ

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

84.3

33.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.3

0.64

0.9

77.6

35.8

Minor 5ss

38.3

-1.3

3.4

54.5

43.9

Minor BPS

56.5

0.28

1.8

75.05

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043582

82345754 - 82364156

18403

ENSAPLT00000036915

82345754 - 82357592

11839

ENSAPLT00000035345

82345754 - 82364065

18312

ENSAPLT00000016119

82345754 - 82364065

18312

ENSAPLT00000048056

82348175 - 82364156

15982