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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82356433_82356784_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82356433 - 82356784

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

AGATGCTGATGC

Flanking Amino Acid:

SAVSVPVMVQTPSQLAWHHT

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

75.3

40.8

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

76.9

0.61

0.8

69.7

36.7

Minor 5ss

40.5

-1.1

3.1

57.5

46.7

Minor BPS

39.8

-0.7

2.2

47.35

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036915

82345754 - 82357592

11839

ENSAPLT00000035345

82345754 - 82364065

18312

ENSAPLT00000016119

82345754 - 82364065

18312

ENSAPLT00000048056

82348175 - 82364156

15982

ENSAPLT00000043582

82345754 - 82364156

18403