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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_82384841_82385873_F

Intron Information:

Intron Rank:
5
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
82384841 - 82385873
Intron Length:
1033

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACG|GTAGGTGTT
5'SS Class:
major
3'SS Sequence:
ATATTGTCTGCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTATAAA
U12 Branch Point Sequence:
ACTTTGTTAATA
Flanking Amino Acid:
HDSLQLKKRLRWYSCMLGKK
Intron Amino Acid Position:
243

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.2
0.69
1
76.5
39.2
Major BPS
78.6
0.71
1
78.6
31
Major PPT
76.8
0.6
0.9
70.3
40.5
Minor 5ss
37.7
-1.4
3.7
57.9
46.7
Minor BPS
57.6
0.24
2
68.6
38.6

Associated Gene:

Gene:
METTL16
Ensembl Gene ID:
ENSAPLG00000023741
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000045771
82380596 - 82394348
13753