Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_82432286_82432606_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82432286 - 82432606

Intron Length:

321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

GTTCTTTGCACT

Flanking Amino Acid:

GDSTRQQAKQICYGIIYGIG

Intron Amino Acid Position:

2229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

73.2

0.52

69.4

36.8

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

48.3

-0

1.9

70.54

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015507

82395586 - 82462917

67332