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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82437868_82462803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82437868 - 82462803

Intron Length:

24936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCTG

5'SS Class:

major

3'SS Sequence:

TGTTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACACAA

U12 Branch Point Sequence:

GTTTTCTTACAG

Flanking Amino Acid:

YEVAEDDVIQVAQIVKHEME

Intron Amino Acid Position:

2397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

57.8

46.6

Major BPS

60.7

0.27

67.2

29.6

Major PPT

89.6

0.89

0.7

84.2

30.9

Minor 5ss

32.6

-2

3.7

46.8

48.5

Minor BPS

57.3

0.09

1.8

64.96

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015507

82395586 - 82462917

67332