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Intron Name: Anas_platyrhynchos_platyrhynchos_1_824842_828188_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

824842 - 828188

Intron Length:

3347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGTTTCAT

5'SS Class:

weak_major

3'SS Sequence:

GGGTTTCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCAAT

U12 Branch Point Sequence:

GCCCTCCCAATG

Flanking Amino Acid:

ACEQSRTSLRELLSSSRCPL

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.1

52.4

39.9

Major BPS

59.3

0.23

1.3

66.9

37.7

Major PPT

64.4

0.32

44.5

Minor 5ss

38.6

-1.3

50.1

46.2

Minor BPS

40.7

-0.8

1.8

37.91

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036699

824308 - 828248

3941