Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_82704849_82734929_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82704849 - 82734929

Intron Length:

30081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTTTCATTT

Flanking Amino Acid:

EANQLFDPRTGTFRCTFCET

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

100

1.24

0.5

100

Major PPT

91.5

0.93

0.7

89.9

24.7

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

0.3

1.7

79.21

37.8

Associated Gene:

Gene:

GTF2E1

Ensembl Gene ID:

ENSAPLG00000006481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006725

82691512 - 82735407

43896

ENSAPLT00000043750

82697244 - 82743855

46612