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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8271262_8347100_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8271262 - 8347100

Intron Length:

75839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAC

U12 Branch Point Sequence:

CACCTGTTACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.5

21.5

Major BPS

59.1

0.23

1.2

52.7

42.9

Major PPT

70.2

0.46

0.8

60.9

35.2

Minor 5ss

42.8

-0.8

2.8

59.5

Minor BPS

43.3

-0.4

2.2

57.35

45.5

Associated Gene:

Gene:

SEMA3A

Ensembl Gene ID:

ENSAPLG00000012883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013411

8271191 - 8515401

244211