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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82735408_82743605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

82735408 - 82743605

Intron Length:

8198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTTTCTCATTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.83

0.7

81.8

28.4

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

49.3

-0.1

1.9

58.64

43.9

Associated Gene:

Gene:

GTF2E1

Ensembl Gene ID:

ENSAPLG00000006481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043750

82697244 - 82743855

46612