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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82744183_82745092_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
82744183 - 82745092

Intron Length:
910

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGA|GTAGGTGCC

5'SS Class:
major

3'SS Sequence:
AATTTTCCACTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATGTAT

U12 Branch Point Sequence:
ATGATGTGAATT

Flanking Amino Acid:
WTVGCSVDVRIHDYKEGTPE

Intron Amino Acid Position:
47

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.3
0.36
1.1
62.6
37.5

Major BPS
63.7
0.34
1.4
63.7
43.9

Major PPT
67.9
0.4
0.9
61.1
40.4

Minor 5ss
33.8
-1.8
3.4
40.5
39.8

Minor BPS
45.5
-0.2
2.1
63.33
41.3

Associated Gene:

Gene:
RABL3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

82743876 - 82751923
8048

82743876 - 82754421
10546