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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82769975_82772490_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

82769975 - 82772490

Intron Length:

2516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGCGACCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGCGAC

U12 Branch Point Sequence:

TGTGCTGCGACC

Flanking Amino Acid:

WDEVEPDPNQLRWKPFEIPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.1

78.8

35.5

Major BPS

44.6

-0.3

1.3

39.2

40.8

Major PPT

59.9

0.22

50.3

43.1

Minor 5ss

40.9

-1

3.2

59.5

Minor BPS

43.6

-0.5

2.2

58.2

41.3

Associated Gene:

Gene:

HGD

Ensembl Gene ID:

ENSAPLG00000006938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019879

82768146 - 82785030

16885

ENSAPLT00000007234

82764180 - 82785030

20851