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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82773276_82774104_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82773276 - 82774104

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCATCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATCCACA

Flanking Amino Acid:

LYNSDGDFLIVPQQGKLLIT

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

0.62

1.4

85.7

34.9

Major PPT

0.59

0.9

69.5

35.8

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

47.1

-0.2

2.3

68.77

43.4

Associated Gene:

Gene:

HGD

Ensembl Gene ID:

ENSAPLG00000006938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019879

82768146 - 82785030

16885

ENSAPLT00000007234

82764180 - 82785030

20851